Domain ID e3ogkM1

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  • A: a+b two layers
  • X: POZ domain
  • H: POZ domain
  • T: POZ domain
  • F: Skp1,Skp1_POZ
UID: 001772748
Type: Automatic domain
Parent: e1fs1B1
Range: M:5-138
PDB: 3ogk
PDB Description: SKP1-like protein 1A
UniProt: Q39255
Hsap BLAST neighbor: P63208
Species: Arabidopsis thaliana

Structure of domain e3ogkM1

Domains in the same chain:

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e3ogkM1 M:5-138 POZ domain POZ domain POZ domain

Domains in the same PDB:

e3ogkA1 A:5-138 POZ domain POZ domain POZ domain
e3ogkB2 B:12-52 F-box domain F-box domain F-box domain
e3ogkB1 B:58-592 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3ogkC1 C:5-138 POZ domain POZ domain POZ domain
e3ogkD2 D:12-52 F-box domain F-box domain F-box domain
e3ogkD1 D:53-592 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3ogkE1 E:5-138 POZ domain POZ domain POZ domain
e3ogkF2 F:12-52 F-box domain F-box domain F-box domain
e3ogkF1 F:53-592 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3ogkG1 G:5-138 POZ domain POZ domain POZ domain
e3ogkH2 H:12-52 F-box domain F-box domain F-box domain
e3ogkH1 H:53-589 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3ogkI1 I:5-138 POZ domain POZ domain POZ domain
e3ogkJ2 J:12-52 F-box domain F-box domain F-box domain
e3ogkJ3 J:58-592 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3ogkK1 K:5-138 POZ domain POZ domain POZ domain
e3ogkL2 L:12-52 F-box domain F-box domain F-box domain
e3ogkL3 L:58-592 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3ogkM1 M:5-138 POZ domain POZ domain POZ domain
e3ogkN2 N:12-52 F-box domain F-box domain F-box domain
e3ogkN3 N:58-592 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3ogkO1 O:5-138 POZ domain POZ domain POZ domain
e3ogkP2 P:12-52 F-box domain F-box domain F-box domain
e3ogkP3 P:58-592 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats

Structural contacts of domain e3ogkM1 of H-group "POZ domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1fs1B1 M:X,Y,Z->N:x,y,z POZ domain Interaction Interface Pymol
e3ogkJ3 M:X,Y,Z->J:x,y,z Leucine-rich repeats Interaction Interface Pymol
e3ogkP3 M:x,y,z->P:X,Y,Z-1 Leucine-rich repeats Interaction Interface Pymol
e3ogkB1 M:x,y,z->B:-X,Y-1/2,-Z Leucine-rich repeats Interaction Interface Pymol