Domain ID e3olbE2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_1
UID: 000408585
Type: Automatic domain
Parent: e1ra6A2
Range: E:1-368
Ligands: DCT IPA ZN
PDB: 3olb
PDB Description: Polymerase
UniProt: B3VQP5
Species:

Structure of domain e3olbE2

Domains in the same chain:

e3olbE2 E:1-368 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3olbE1 E:369-461 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Domains in the same PDB:

e3olbA2 A:1-368 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3olbA1 A:369-461 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3olbE2 E:1-368 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3olbE1 E:369-461 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3olbI2 I:1-368 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3olbI1 I:369-461 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3olbM2 M:1-368 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3olbM1 M:369-461 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Structural contacts of domain e3olbE2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3olbA1 E:X-1,Y,Z->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3olbI2 E:X,Y,Z->I:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3olbI2 E:X-1,Y,Z->I:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3olbE2 E:x,y,z->E:X-1,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3olbE2 E:X-1,Y,Z->E:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3olbA2 E:X-1,Y-1,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol