ECOD: domain e3oybB1

Domain ID e3oybB1

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: rve

UID:	001116127
Type:	Automatic domain
Parent:	e1cxqA1
Range:	B:116-299
Ligands:	GOL MG SO4
PDB:	3oyb
PDB Description:	PFV INTEGRASE
UniProt:	P14350
Hsap BLAST neighbor:	Q6ZNG9
Species:

Domains in the same chain:

Download Pymol

e3oybB1	B:116-299	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Domains in the same PDB:

e3oybA2	A:8-108	HTH	HTH	tri-helical
e3oybA3	A:109-312	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3oybA1	A:313-375	SH3	SH3	SH3
e3oybB1	B:116-299	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Structural contacts of domain e3oybB1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3oybA3	B:x,y,z->A:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol
e3oybB1	B:x,y,z->B:-Y,-X,-Z+1/2	Ribonuclease H-like	Interaction Interface Pymol
e3oybB1	B:-Y,-X,-Z+1/2->B:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3oybA2	B:X-1/2,-Y+1/2,-Z-1/4->A:x,y,z	HTH	Interaction Interface Pymol