ECOD: domain e3oydA2

Domain ID e3oydA2

A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: Integrase_H2C2

UID:	000405793
Type:	Automatic domain
Parent:	e3l2qA1
Range:	A:8-108
Ligands:	GOL ZN
PDB:	3oyd
PDB Description:	PFV INTEGRASE
UniProt:	P14350
Species:

Domains in the same chain:

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e3oydA2	A:8-108	HTH	HTH	tri-helical
e3oydA3	A:109-312	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3oydA1	A:313-375	SH3	SH3	SH3

Domains in the same PDB:

e3oydA2	A:8-108	HTH	HTH	tri-helical
e3oydA3	A:109-312	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3oydA1	A:313-375	SH3	SH3	SH3
e3oydB1	B:116-299	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Structural contacts of domain e3oydA2 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3oydA3	A:x,y,z->A:-Y,-X,-Z-1/2	Ribonuclease H-like	Interaction Interface Pymol
e3oydA3	A:-Y,-X,-Z-1/2->A:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3oydB1	A:x,y,z->B:X-1/2,-Y+1/2,-Z-1/4	Ribonuclease H-like	Interaction Interface Pymol