Domain ID e3p06A1

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Unmapped domains
UID: 000146305
Type: Manual and representative domain
Range: A:637-752
Ligands: BME GOL SO4
PDB: 3p06
PDB Description: VP4 PROTEIN
UniProt: Q2PBR5
Species: Tellina virus 1

Structure of domain e3p06A1

Structural contacts of domain e3p06A1 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3p06A2 A:x,y,z->A:-X,-Y,Z C-terminal subdomain in Lon-related proteases catalytic domains Interaction Interface Pymol
e3p06A1 A:x,y,z->A:-X,-Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A1 A:-X,-Y,Z->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A2 A:-X,-Y,Z->A:x,y,z C-terminal subdomain in Lon-related proteases catalytic domains Interaction Interface Pymol
e3p06A1 A:x,y,z->A:-X+Y,Y,-Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A1 A:-X+Y,Y,-Z->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A1 A:x,y,z->A:-X,-Y+1,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A2 A:x,y,z->A:-X,-Y+1,Z C-terminal subdomain in Lon-related proteases catalytic domains Interaction Interface Pymol
e3p06A2 A:-X,-Y+1,Z->A:x,y,z C-terminal subdomain in Lon-related proteases catalytic domains Interaction Interface Pymol
e3p06A1 A:-X,-Y+1,Z->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A2 A:x,y,z->A:-X+1,-Y+1,Z C-terminal subdomain in Lon-related proteases catalytic domains Interaction Interface Pymol
e3p06A1 A:x,y,z->A:-X+1,-Y+1,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A1 A:-X+1,-Y+1,Z->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3p06A2 A:-X+1,-Y+1,Z->A:x,y,z C-terminal subdomain in Lon-related proteases catalytic domains Interaction Interface Pymol