ECOD: domain e3p16A1

Domain ID e3p16A1

A: a+b two layers
X: DNA clamp
H: DNA clamp
T: DNA clamp
F: DNA_pol3_beta

UID:	000144382
Type:	Automatic domain
Parent:	e1ok7A1
Range:	A:12-133
PDB:	3p16
PDB Description:	DNA POLYMERASE III SUBUNIT BETA
UniProt:	P9WNU1
Species:

Domain
In chain context
In PDB context

Structure of domain e3p16A1

Domains in the same chain:

Download Pymol

e3p16A1	A:12-133	DNA clamp	DNA clamp	DNA clamp
e3p16A2	A:134-261	DNA clamp	DNA clamp	DNA clamp
e3p16A3	A:262-400	DNA clamp	DNA clamp	DNA clamp

Domains in the same PDB:

e3p16A1	A:12-133	DNA clamp	DNA clamp	DNA clamp
e3p16A2	A:134-261	DNA clamp	DNA clamp	DNA clamp
e3p16A3	A:262-400	DNA clamp	DNA clamp	DNA clamp
e3p16B1	B:13-133	DNA clamp	DNA clamp	DNA clamp
e3p16B2	B:134-261	DNA clamp	DNA clamp	DNA clamp
e3p16B3	B:262-400	DNA clamp	DNA clamp	DNA clamp
e3p16C1	C:13-133	DNA clamp	DNA clamp	DNA clamp
e3p16C2	C:134-261	DNA clamp	DNA clamp	DNA clamp
e3p16C3	C:262-400	DNA clamp	DNA clamp	DNA clamp
e3p16D1	D:13-133	DNA clamp	DNA clamp	DNA clamp
e3p16D2	D:134-261	DNA clamp	DNA clamp	DNA clamp
e3p16D3	D:262-400	DNA clamp	DNA clamp	DNA clamp
e3p16E1	E:13-133	DNA clamp	DNA clamp	DNA clamp
e3p16E2	E:134-261	DNA clamp	DNA clamp	DNA clamp
e3p16E3	E:262-400	DNA clamp	DNA clamp	DNA clamp
e3p16F1	F:13-133	DNA clamp	DNA clamp	DNA clamp
e3p16F2	F:134-261	DNA clamp	DNA clamp	DNA clamp
e3p16F3	F:262-400	DNA clamp	DNA clamp	DNA clamp

Structural contacts of domain e3p16A1 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3p16B3	A:X,Y,Z->B:x,y,z	DNA clamp	Interaction Interface Pymol
e3p16C1	A:x,y,z->C:-X+1,Y-1/2,-Z+1	DNA clamp	Interaction Interface Pymol
e3p16E2	A:X-1,Y,Z-1->E:x,y,z	DNA clamp	Interaction Interface Pymol