ECOD: domain e3p5cL5

Domain ID e3p5cL5

A: few secondary structure elements
X: EGF-like
H: LDL receptor-like module
T: LDL receptor-like module
F: Ldl_recept_a

UID:	000145062
Type:	Automatic domain
Parent:	e2fcwB1
Range:	L:255-293
Ligands:	CA
PDB:	3p5c
PDB Description:	Low density lipoprotein receptor variant
UniProt:	P01130
Hsap BLAST neighbor:	P01130
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3p5cL5

Domains in the same chain:

Download Pymol

e3p5cL5	L:255-293	EGF-like	LDL receptor-like module	LDL receptor-like module
e3p5cL4	L:293-332	EGF-like	EGF-related	EGF/Laminin
e3p5cL9	L:333-373	EGF-like	EGF-related	EGF/Laminin
e3p5cL8	L:374-642	beta-propeller-like	beta-propeller	6-bladed
e3p5cL2	L:643-694	EGF-like	EGF-related	EGF/Laminin

Domains in the same PDB:

e3p5cA1	A:153-434	Subtilisin-like	Subtilisin-like	Subtilisin-like
e3p5cA3	A:449-530	Resistin	Resistin	Resistin
e3p5cA5	A:531-604	Resistin	Resistin	Resistin
e3p5cA4	A:605-682	Resistin	Resistin	Resistin
e3p5cL5	L:255-293	EGF-like	LDL receptor-like module	LDL receptor-like module
e3p5cL4	L:293-332	EGF-like	EGF-related	EGF/Laminin
e3p5cL9	L:333-373	EGF-like	EGF-related	EGF/Laminin
e3p5cL8	L:374-642	beta-propeller-like	beta-propeller	6-bladed
e3p5cL2	L:643-694	EGF-like	EGF-related	EGF/Laminin
e3p5cP2	P:61-152	Alpha-beta plaits	Protease propeptides/inhibitors	Protease propeptides/inhibitors

Structural contacts of domain e3p5cL5 of H-group "LDL receptor-like module":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3p5cA1	L:-Y,X-Y+1,Z-1/3->A:x,y,z	Subtilisin-like	Interaction Interface Pymol
e3p5cA3	L:-Y,X-Y+1,Z-1/3->A:x,y,z	Resistin	Interaction Interface Pymol
e3p5cA4	L:-Y,X-Y+1,Z-1/3->A:x,y,z	Resistin	Interaction Interface Pymol