| UID: | 000411063 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1ryqA1 |
| Range: | C:2-61 |
| Ligands: | GOL ZN |
| PDB: | 3p8b |
| PDB Description: | DNA-directed RNA polymerase, subunit e'' |
| UniProt: | Q8U440 |
| Species: | Pyrococcus furiosus |
Structure of domain e3p8bC1
Domains in the same chain:
| e3p8bC1 | C:2-61 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Domains in the same PDB:
Structural contacts of domain e3p8bC1 of H-group "Rubredoxin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3p8bD2 | C:X,Y,Z->D:x,y,z | N-utilization substance G protein NusG, N-terminal domain | Interaction Interface Pymol |
| e3p8bD1 | C:X,Y,Z->D:x,y,z | SH3 | Interaction Interface Pymol |
| e3p8bD1 | C:-X+1,Y-1/2,-Z+1/2->D:x,y,z | SH3 | Interaction Interface Pymol |
| e3p8bA1 | C:X-1,Y,Z->A:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e3p8bB2 | C:-X+1,-Y+1/2,Z-1/2->B:x,y,z | N-utilization substance G protein NusG, N-terminal domain | Interaction Interface Pymol |
| e3p8bB1 | C:X-1,Y,Z->B:x,y,z | SH3 | Interaction Interface Pymol |
