| UID: | 000427135 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1e1oA2 |
| Range: | A:1-294 |
| Ligands: | ASN |
| PDB: | 3p8y |
| PDB Description: | AsnS-like asparaginyl-tRNA synthetase related protein |
| UniProt: | Q9V228 |
| Hsap BLAST neighbor: | Q96I59 |
| Species: | Pyrococcus abyssi |
Structure of domain e3p8yA1
Domains in the same chain:
| e3p8yA1 | A:1-294 | Class II aaRS and biotin synthetases | Class II aaRS and biotin synthetases | Class II aaRS and biotin synthetases |
Domains in the same PDB:
Structural contacts of domain e3p8yA1 of H-group "Class II aaRS and biotin synthetases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3p8yB1 | A:X,Y,Z->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yA1 | A:x,y,z->A:X-1/2,-Y+1/2,-Z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yA1 | A:X-1/2,-Y+1/2,-Z->A:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yB1 | A:X-1/2,-Y-1/2,-Z->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yB1 | A:-X-1,Y-1/2,-Z+1/2->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yA1 | A:x,y,z->A:X-1/2,-Y-1/2,-Z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yA1 | A:X-1/2,-Y-1/2,-Z->A:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yB1 | A:X,Y-1,Z->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e3p8yB1 | A:-X,Y-1/2,-Z+1/2->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
