Domain ID e3p9rB6

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  • A: beta barrels
  • X: Barrel domain in heme-dependent catalases
  • H: Barrel domain in heme-dependent catalases
  • T: Barrel domain in heme-dependent catalases
  • F: Catalase
UID: 001272306
Type: Automatic domain
Parent: e1gweA1
Range: B:28-203,B:264-502
Ligands: HDD
PDB: 3p9r
PDB Description: Catalase HPII
UniProt: P21179
Hsap BLAST neighbor: P04040
Species:

Structure of domain e3p9rB6

Domains in the same chain:

e3p9rB6 B:28-203,B:264-502 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3p9rB5 B:204-263 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3p9rB7 B:503-597 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3p9rB4 B:598-753 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like

Domains in the same PDB:

e3p9rA6 A:28-203,A:264-502 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3p9rA5 A:204-263 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3p9rA7 A:503-597 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3p9rA4 A:598-753 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e3p9rB6 B:28-203,B:264-502 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3p9rB5 B:204-263 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3p9rB7 B:503-597 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3p9rB4 B:598-753 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e3p9rC6 C:28-203,C:264-502 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3p9rC5 C:204-263 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3p9rC7 C:503-597 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3p9rC4 C:598-753 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e3p9rD6 D:28-203,D:264-502 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3p9rD5 D:204-263 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3p9rD7 D:503-597 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3p9rD4 D:598-753 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like

Structural contacts of domain e3p9rB6 of H-group "Barrel domain in heme-dependent catalases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3p9rC7 B:X,Y,Z->C:x,y,z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3p9rC6 B:X,Y,Z->C:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3p9rC5 B:X,Y,Z->C:x,y,z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3p9rD6 B:X,Y,Z->D:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3p9rA7 B:x,y,z->A:X,Y,Z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3p9rA5 B:x,y,z->A:X,Y,Z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3p9rA6 B:x,y,z->A:X,Y,Z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3p9rA6 B:-X,Y-1/2,-Z->A:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3p9rC6 B:-X,Y-1/2,-Z->C:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol