Domain ID e3pd8B2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001525469
Type: Automatic domain
Parent: e1mqiA3
Range: B:-1-105,B:216-259
Ligands: CAC GOL HA7 ZN
PDB: 3pd8
PDB Description: Glutamate receptor 2
UniProt: P19491
Hsap BLAST neighbor: P42262
Species: Rattus norvegicus

Structure of domain e3pd8B2

Structural contacts of domain e3pd8B2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pd8A1 B:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e3pd8A2 B:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e3pd8B2 B:x,y,z->B:X,Y,Z-1 Periplasmic binding protein-like II Interaction Interface Pymol
e3pd8B2 B:X,Y,Z-1->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3pd8B1 B:X,Y,Z-1->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3pd8A1 B:X-1/2,-Y+1/2,-Z+2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3pd8A2 B:X-1/2,-Y+1/2,-Z+2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3pd8C1 B:X,Y,Z->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol