Domain ID e3pduD2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: NAD_binding_2
UID: 000980848
Type: Automatic domain
Parent: e2pgdA2
Range: D:1-163
Ligands: NAP
PDB: 3pdu
PDB Description: 3-hydroxyisobutyrate dehydrogenase family protein
UniProt: Q74DE4
Hsap BLAST neighbor: Q49A26
Species: Geobacter sulfurreducens

Structure of domain e3pduD2

Domains in the same chain:

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e3pduD2 D:1-163 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduD1 D:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like

Domains in the same PDB:

e3pduA2 A:1-163 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduA3 A:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3pduB2 B:1-162 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduB3 B:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3pduC2 C:1-162 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduC1 C:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3pduD2 D:1-163 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduD1 D:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3pduE2 E:1-163 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduE1 E:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3pduF2 F:1-162 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduF1 F:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3pduG2 G:1-161 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduG3 G:163-286 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3pduH2 H:1-162 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3pduH3 H:163-287 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like

Structural contacts of domain e3pduD2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pduB3 D:x,y,z->B:X,Y,Z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e3pduE2 D:X,Y,Z->E:x,y,z Rossmann-related Interaction Interface Pymol
e3pduF2 D:X,Y,Z->F:x,y,z Rossmann-related Interaction Interface Pymol