ECOD: domain e3pfnD2

Domain ID e3pfnD2

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Class I glutamine amidotransferase-like
T: Phosphofructokinase N-terminal domain
F: NAD_kinase

UID:	001175472
Type:	Automatic domain
Parent:	e1u0tA2
Range:	D:69-232
Ligands:	UNX
PDB:	3pfn
PDB Description:	NAD kinase
UniProt:	O95544
Hsap BLAST neighbor:	O95544
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3pfnD2	D:69-232	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e3pfnD3	D:233-246,D:276-425	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like

Domains in the same PDB:

e3pfnA3	A:72-232	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e3pfnA4	A:233-246,A:276-427	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like
e3pfnB3	B:69-232	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e3pfnB2	B:233-246,B:276-427	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like
e3pfnC2	C:72-232	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e3pfnC3	C:233-245,C:275-427	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like
e3pfnD2	D:69-232	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e3pfnD3	D:233-246,D:276-425	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like

Structural contacts of domain e3pfnD2 of H-group "Class I glutamine amidotransferase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3pfnC3	D:x,y,z->C:X,Y,Z	NAD kinase beta sandwich domain-like	Interaction Interface Pymol
e3pfnC2	D:x,y,z->C:X,Y,Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3pfnA3	D:x,y,z->A:X-1/2,-Y-1/2,-Z+1	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3pfnA3	D:x,y,z->B:-X+3/2,-Y,Z-1/2	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3pfnC2	D:x,y,z->C:-X+1,Y-1/2,-Z+1/2	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3pfnA4	D:x,y,z->A:-X+3/2,-Y,Z-1/2	NAD kinase beta sandwich domain-like	Interaction Interface Pymol
e3pfnA4	D:x,y,z->B:-X+1,Y-1/2,-Z+1/2	NAD kinase beta sandwich domain-like	Interaction Interface Pymol