ECOD: domain e3pgfA1

Domain ID e3pgfA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_1

UID:	001522140
Type:	Automatic domain
Parent:	e4pqkB1
Range:	A:1-109,A:260-367
Ligands:	IMD
PDB:	3pgf
PDB Description:	Maltose-binding periplasmic protein
UniProt:	P0AEX9
Species:

Domain
In chain context
In PDB context

Structure of domain e3pgfA1

Domains in the same chain:

Download Pymol

e3pgfA1	A:1-109,A:260-367	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3pgfA2	A:110-259	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3pgfA1	A:1-109,A:260-367	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3pgfA2	A:110-259	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3pgfH1	H:2-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3pgfH2	H:114-216	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3pgfL1	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3pgfL2	L:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3pgfA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3pgfA1	A:x,y,z->A:X,-Y,-Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3pgfA1	A:X,-Y,-Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3pgfL1	A:X,Y,Z->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol