Domain ID e3pibD1

Download files:
  • A: beta barrels
  • X: GFP-like
  • H: GFP-like
  • T: GFP-like
  • F: GFP
UID: 000420259
Type: Automatic domain
Parent: e1oxdA1
Range: D:2-231
Ligands: GOL
PDB: 3pib
PDB Description: EQFP578 FLUORESCENT PROTEIN
UniProt: H3JQU4
Species: Entacmaea quadricolor

Structure of domain e3pibD1

Domains in the same chain:

e3pibD1 D:2-231 GFP-like GFP-like GFP-like

Domains in the same PDB:

e3pibA1 A:1-229 GFP-like GFP-like GFP-like
e3pibB1 B:-6-231 GFP-like GFP-like GFP-like
e3pibC1 C:2-229 GFP-like GFP-like GFP-like
e3pibD1 D:2-231 GFP-like GFP-like GFP-like

Structural contacts of domain e3pibD1 of H-group "GFP-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pibA1 D:x,y,z->A:X,Y,Z GFP-like Interaction Interface Pymol
e3pibC1 D:x,y,z->C:X,Y,Z GFP-like Interaction Interface Pymol
e3pibB1 D:-Y+1/2,X,Z-1/4->B:x,y,z GFP-like Interaction Interface Pymol
e3pibA1 D:x,y,z->A:-Y,X-1/2,Z+1/4 GFP-like Interaction Interface Pymol
e3pibC1 D:x,y,z->C:-Y,X-1/2,Z+1/4 GFP-like Interaction Interface Pymol
e3pibA1 D:X,Y,Z-1->A:x,y,z GFP-like Interaction Interface Pymol
e3pibC1 D:-Y+1/2,X,Z-1/4->C:x,y,z GFP-like Interaction Interface Pymol
e3pibB1 D:x,y,z->B:X,Y,Z GFP-like Interaction Interface Pymol