Domain ID e3pmsA2

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: N-glycanase_C
UID: 000142168
Type: Automatic domain
Parent: e1pgsA2
Range: A:141-315
Ligands: ACT GOL SO4
PDB: 3pms
PDB Description: PEPTIDE:N-GLYCOSIDASE F
UniProt: Q9XBM8
Species: Elizabethkingia meningoseptica

Structure of domain e3pmsA2

Structural contacts of domain e3pmsA2 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pmsA2 A:x,y,z->A:X,Y,Z-1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3pmsA1 A:X,Y,Z-1->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3pmsA2 A:X,Y,Z-1->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3pmsA1 A:x,y,z->A:-X-1,Y-1/2,-Z-1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3pmsA2 A:x,y,z->A:X-1,Y,Z-1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3pmsA2 A:X-1,Y,Z-1->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3pmsA1 A:X-1,Y,Z-1->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3pmsA1 A:x,y,z->A:-X-1,Y-1/2,-Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol