Domain ID e3po4A2

Download files:
  • A: alpha bundles
  • X: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • H: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • T: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • F: DNA_pol_A
UID: 000422013
Type: Automatic domain
Parent: e2hhvA2
Range: A:423-600
Ligands: DDS GOL NA
PDB: 3po4
PDB Description: DNA polymerase I
UniProt: P19821
Hsap BLAST neighbor: Q7Z5Q5
Species: Thermus aquaticus

Structure of domain e3po4A2

Structural contacts of domain e3po4A2 of H-group ""fingers" domain in bacteriophage RB69-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3po4A1 A:x,y,z->A:-X,-X+Y,-Z+1/3 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e3po4A1 A:-X,-X+Y,-Z+1/3->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e3po4A4 A:Y,X-1,-Z->A:x,y,z Ribonuclease H-like Interaction Interface Pymol