Domain ID e3prxD6

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: A2M_BRD
UID: 001138718
Type: Automatic domain
Parent: e3pvmB5
Range: D:437-543
PDB: 3prx
PDB Description: COBRA VENOM FACTOR
UniProt: Q91132
Hsap BLAST neighbor: P01024
Species: Naja kaouthia

Structure of domain e3prxD6

Domains in the same chain:

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e3prxD7 D:23-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD5 D:125-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD8 D:219-341 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD9 D:342-436 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD6 D:437-543 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD4 D:544-646,D:736-811 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD3 D:812-918 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD2 D:919-969,D:1271-1333 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3prxD10 D:1334-1472 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3prxD1 D:1473-1642 OB-fold TIMP-like TIMP-like

Domains in the same PDB:

e3prxA10 A:20-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxA9 A:122-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxA5 A:223-348 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxA7 A:349-459 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxA8 A:460-565,A:612-673 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxA12 A:566-611,A:766-821 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxA1 A:679-765 Anaphylotoxins (complement system) Anaphylotoxins (complement system) Anaphylotoxins (complement system)
e3prxA6 A:822-932 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxA11 A:933-985,A:1309-1369 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3prxA2 A:986-1308 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e3prxA4 A:1370-1515 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3prxA3 A:1516-1676 OB-fold TIMP-like TIMP-like
e3prxB20 B:23-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxB14 B:125-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxB17 B:219-341 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxB11 B:342-436 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxB12 B:437-543 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxB16 B:544-646,B:736-811 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxB15 B:812-918 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxB18 B:919-969,B:1271-1333 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3prxB19 B:1334-1472 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3prxB13 B:1473-1642 OB-fold TIMP-like TIMP-like
e3prxC10 C:20-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxC9 C:122-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxC5 C:223-348 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxC7 C:349-459 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxC8 C:460-565,C:612-673 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxC12 C:566-611,C:766-821 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxC1 C:679-765 Anaphylotoxins (complement system) Anaphylotoxins (complement system) Anaphylotoxins (complement system)
e3prxC6 C:822-932 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxC11 C:933-985,C:1309-1369 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3prxC2 C:986-1308 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e3prxC4 C:1370-1515 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3prxC3 C:1516-1676 OB-fold TIMP-like TIMP-like
e3prxD7 D:23-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD5 D:125-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD8 D:219-341 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD9 D:342-436 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD6 D:437-543 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD4 D:544-646,D:736-811 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD3 D:812-918 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3prxD2 D:919-969,D:1271-1333 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3prxD10 D:1334-1472 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3prxD1 D:1473-1642 OB-fold TIMP-like TIMP-like
e3prxX1 X:40-126 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e3prxX2 X:127-230 beta-Grasp Ubiquitin-related Ubiquitin-like
e3prxY1 Y:40-126 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e3prxY2 Y:127-230 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e3prxD6 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3prxC8 D:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3prxC7 D:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3prxA2 D:x,y,z->A:-X+1,Y,-Z-1/2 alpha/alpha toroid Interaction Interface Pymol