ECOD: domain e3pt9A4

Domain ID e3pt9A4

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: S-adenosyl-L-methionine-dependent methyltransferases
F: DNA_methylase

UID:	001175030
Type:	Automatic domain
Parent:	e2c7pA1
Range:	A:1137-1600
Ligands:	SAH ZN
PDB:	3pt9
PDB Description:	DNA (cytosine-5)-methyltransferase 1
UniProt:	P13864
Hsap BLAST neighbor:	P26358
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e3pt9A4

Domains in the same chain:

Download Pymol

e3pt9A6	A:730-910	SH3	SH3	SH3
e3pt9A5	A:911-1110	SH3	SH3	SH3
e3pt9A4	A:1137-1600	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e3pt9A6	A:730-910	SH3	SH3	SH3
e3pt9A5	A:911-1110	SH3	SH3	SH3
e3pt9A4	A:1137-1600	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e3pt9A4 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3pt9A5	A:-X,Y-1/2,-Z+1/2->A:x,y,z	SH3	Interaction Interface Pymol
e3pt9A4	A:x,y,z->A:X-1/2,-Y+1/2,-Z	Rossmann-related	Interaction Interface Pymol
e3pt9A4	A:X-1/2,-Y+1/2,-Z->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3pt9A5	A:x,y,z->A:X-1,Y,Z	SH3	Interaction Interface Pymol
e3pt9A4	A:x,y,z->A:X-1,Y,Z	Rossmann-related	Interaction Interface Pymol
e3pt9A4	A:X-1,Y,Z->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3pt9A6	A:X-1,Y,Z->A:x,y,z	SH3	Interaction Interface Pymol
e3pt9A6	A:x,y,z->A:-X-1/2,-Y,Z-1/2	SH3	Interaction Interface Pymol
e3pt9A6	A:x,y,z->A:-X-1,Y-1/2,-Z+1/2	SH3	Interaction Interface Pymol
e3pt9A4	A:x,y,z->A:X-1/2,-Y-1/2,-Z	Rossmann-related	Interaction Interface Pymol
e3pt9A4	A:X-1/2,-Y-1/2,-Z->A:x,y,z	Rossmann-related	Interaction Interface Pymol