Domain ID e3pujB5

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  • A: alpha complex topology
  • X: alpha-helical domain in sec1/munc18-like (SM) proteins
  • H: alpha-helical domain in sec1/munc18-like (SM) proteins
  • T: alpha-helical domain in sec1/munc18-like (SM) proteins
  • F: Sec1
UID: 001190175
Type: Automatic domain
Parent: e1epuA1
Range: B:239-451
PDB: 3puj
PDB Description: SYNTAXIN-BINDING PROTEIN 1
UniProt: P61765
Hsap BLAST neighbor: P61764
Species: Rattus norvegicus

Structure of domain e3pujB5

Domains in the same chain:

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e3pujB2 B:4-136 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e3pujB3 B:137-239,B:481-511,B:533-591 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e3pujB5 B:239-451 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins

Domains in the same PDB:

e3pujA2 A:3-135 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e3pujA3 A:137-239,A:481-503,A:532-590 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e3pujA1 A:238-478 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins
e3pujB2 B:4-136 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e3pujB3 B:137-239,B:481-511,B:533-591 Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins Rossmann-like domains in Sec1/munc18-like proteins
e3pujB5 B:239-451 alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins alpha-helical domain in sec1/munc18-like (SM) proteins

Structural contacts of domain e3pujB5 of H-group "alpha-helical domain in sec1/munc18-like (SM) proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pujA1 B:x,y,z->A:X,Y,Z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e3pujB5 B:x,y,z->B:Y,X,-Z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol
e3pujB5 B:Y,X,-Z->B:x,y,z alpha-helical domain in sec1/munc18-like (SM) proteins Interaction Interface Pymol