ECOD: domain e3pyiA2

Domain ID e3pyiA2

A: beta barrels
X: XRCC4, N-terminal domain-like
H: XRCC4, N-terminal domain
T: XRCC4, N-terminal domain
F: Unmapped domains

UID:	001789717
Type:	Automatic domain
Parent:	e4gexB1
Range:	A:2-71,A:130-168
Ligands:	PG4
PDB:	3pyi
PDB Description:	Spindle assembly abnormal protein 6
UniProt:	O62479
Species:	Caenorhabditis elegans

Domain
In chain context
In PDB context

Structure of domain e3pyiA2

Domains in the same chain:

Download Pymol

e3pyiA2	A:2-71,A:130-168	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e3pyiA1	A:72-104	HTH	HTH	HTH motif inserted in other structures

Domains in the same PDB:

e3pyiA2	A:2-71,A:130-168	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e3pyiA1	A:72-104	HTH	HTH	HTH motif inserted in other structures
e3pyiB2	B:3-71,B:130-167	XRCC4, N-terminal domain-like	XRCC4, N-terminal domain	XRCC4, N-terminal domain
e3pyiB1	B:72-105,B:128-129	HTH	HTH	HTH motif inserted in other structures

Structural contacts of domain e3pyiA2 of H-group "XRCC4, N-terminal domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3pyiB2	A:X,Y,Z->B:x,y,z	XRCC4, N-terminal domain	Interaction Interface Pymol
e3pyiB1	A:X,Y,Z->B:x,y,z	HTH	Interaction Interface Pymol
e3pyiA2	A:x,y,z->A:-X,Y-1/2,-Z+1/2	XRCC4, N-terminal domain	Interaction Interface Pymol
e3pyiA1	A:x,y,z->A:-X,Y-1/2,-Z+1/2	HTH	Interaction Interface Pymol
e3pyiA2	A:-X,Y-1/2,-Z+1/2->A:x,y,z	XRCC4, N-terminal domain	Interaction Interface Pymol
e3pyiB1	A:X-1/2,-Y-1/2,-Z->B:x,y,z	HTH	Interaction Interface Pymol
e3pyiB1	A:-X-1/2,-Y,Z-1/2->B:x,y,z	HTH	Interaction Interface Pymol
e3pyiB2	A:-X+1/2,-Y,Z-1/2->B:x,y,z	XRCC4, N-terminal domain	Interaction Interface Pymol