Domain ID e3q5eC2

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GBP
UID: 001611575
Type: Automatic domain
Parent: e4idnB1
Range: C:30-344
Ligands: GDP MG
PDB: 3q5e
PDB Description: Atlastin-1
UniProt: Q8WXF7
Hsap BLAST neighbor: Q8WXF7
Species: Homo sapiens

Structure of domain e3q5eC2

Domains in the same chain:

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e3q5eC2 C:30-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3q5eC1 C:345-438 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain

Domains in the same PDB:

e3q5eA1 A:30-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3q5eA2 A:345-440 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e3q5eC2 C:30-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3q5eC1 C:345-438 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e3q5eE2 E:30-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3q5eE1 E:345-438 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e3q5eG2 G:30-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3q5eG1 G:345-438 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain

Structural contacts of domain e3q5eC2 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3q5eA1 C:x,y,z->A:X-1/2,-Y+1/2,-Z P-loop domains-related Interaction Interface Pymol
e3q5eA1 C:x,y,z->A:X-1,Y,Z P-loop domains-related Interaction Interface Pymol
e3q5eA1 C:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3q5eC2 C:x,y,z->C:X-1/2,-Y+1/2,-Z P-loop domains-related Interaction Interface Pymol
e3q5eC2 C:X-1/2,-Y+1/2,-Z->C:x,y,z P-loop domains-related Interaction Interface Pymol