Domain ID e3q6rA1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Calici_coat_C
UID: 001696433
Type: Automatic domain
Parent: e3lq6A1
Range: A:224-538
Ligands: EDO IMD
PDB: 3q6r
PDB Description: CAPSID PROTEIN
UniProt: Q5F4T5
Species: Norwalk virus

Structure of domain e3q6rA1

Structural contacts of domain e3q6rA1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3q6rB1 A:X,Y,Z->B:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3q6rB1 A:-X,Y-1/2,-Z+1->B:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3q6rA1 A:x,y,z->A:-X,Y-1/2,-Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3q6rA1 A:-X,Y-1/2,-Z->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3q6rB1 A:x,y,z->B:X-1,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3q6rB1 A:x,y,z->B:X,Y,Z-1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3q6rA1 A:x,y,z->A:X,Y,Z-1 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3q6rA1 A:X,Y,Z-1->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol