Domain ID e3q8vD1

Download files:
  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Nucleoside diphosphate kinases
  • T: Nucleoside diphosphate kinases
  • F: NDK
UID: 000424960
Type: Automatic domain
Parent: e3bbbA1
Range: D:1-149
Ligands: MG UDP
PDB: 3q8v
PDB Description: NUCLEOSIDE DIPHOSPHATE KINASE
UniProt: Q5HFV4
Hsap BLAST neighbor: Q13232
Species:

Structure of domain e3q8vD1

Structural contacts of domain e3q8vD1 of H-group "Nucleoside diphosphate kinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3q8vF1 D:X,Y,Z->F:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3q8vB1 D:x,y,z->B:X,Y,Z Nucleoside diphosphate kinases Interaction Interface Pymol
e3q8vA1 D:x,y,z->A:X,Y,Z Nucleoside diphosphate kinases Interaction Interface Pymol
e3q8vH1 D:X,Y,Z->H:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3q8vC1 D:x,y,z->C:X,Y,Z Nucleoside diphosphate kinases Interaction Interface Pymol
e3q8vB1 D:-X+1/2,Y-1/2,-Z->B:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3q8vG1 D:X,Y,Z->G:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol