ECOD: domain e3qemB1

Domain ID e3qemB1

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Class I glutamine amidotransferase-like
T: Periplasmic binding protein-like I
F: ANF_receptor

UID:	001761771
Type:	Automatic domain
Parent:	e4pe5B2
Range:	B:148-285
Ligands:	QEM
PDB:	3qem
PDB Description:	GLUTAMATE [NMDA] RECEPTOR SUBUNIT EPSILON-2
UniProt:	Q00960
Hsap BLAST neighbor:	Q13224
Species:	Rattus norvegicus

Domain
In chain context
In PDB context

Structure of domain e3qemB1

Domains in the same chain:

Download Pymol

e3qemB2	B:32-147,B:286-393	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemB1	B:148-285	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I

Domains in the same PDB:

e3qemA2	A:23-147,A:322-405	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemA1	A:143-185,A:209-293	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemB2	B:32-147,B:286-393	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemB1	B:148-285	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemC2	C:24-142,C:294-405	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemC1	C:143-185,C:210-293	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemD2	D:33-147,D:286-393	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I
e3qemD1	D:148-285	Flavodoxin-like	Class I glutamine amidotransferase-like	Periplasmic binding protein-like I

Structural contacts of domain e3qemB1 of H-group "Class I glutamine amidotransferase-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3qemA2	B:x,y,z->A:X,Y,Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3qemC2	B:-X+1/2,Y-1/2,-Z->C:x,y,z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3qemA2	B:X,Y-1,Z->A:x,y,z	Class I glutamine amidotransferase-like	Interaction Interface Pymol