Domain ID e3qgaF4

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Amidohydro_1
UID: 001240154
Type: Automatic domain
Parent: e2eg6A1
Range: F:130-432,F:482-568
Ligands: FE
PDB: 3qga
PDB Description: UREASE SUBUNIT BETA 2
UniProt: D3UJ80
Species:

Structure of domain e3qgaF4

Domains in the same chain:

e3qgaF3 F:1-129,F:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgaF4 F:130-432,F:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e3qgaA1 A:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgaA2 A:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgaC3 C:1-129,C:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgaC4 C:130-432,C:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgaD2 D:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgaD1 D:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgaF3 F:1-129,F:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgaF4 F:130-432,F:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgaG2 G:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgaG1 G:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgaI3 I:1-129,I:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgaI4 I:130-432,I:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgaJ2 J:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgaJ1 J:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgaL3 L:1-129,L:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgaL4 L:130-432,L:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgaM2 M:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgaM1 M:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgaO3 O:1-129,O:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgaO4 O:130-432,O:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgaP2 P:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgaP1 P:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgaR3 R:1-129,R:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgaR4 R:130-432,R:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e3qgaF4 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3qgaD2 F:x,y,z->D:X,Y,Z Urease, gamma-subunit Interaction Interface Pymol
e3qgaD1 F:x,y,z->D:X,Y,Z Urease, beta-subunit Interaction Interface Pymol
e3qgaI4 F:X,Y,Z->I:x,y,z TIM barrels Interaction Interface Pymol
e3qgaI3 F:X,Y,Z->I:x,y,z Composite domain of metallo-dependent hydrolases Interaction Interface Pymol
e3qgaC4 F:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e3qgaG2 F:x,y,z->G:X,Y,Z Urease, gamma-subunit Interaction Interface Pymol
e3qgaG1 F:x,y,z->G:X,Y,Z Urease, beta-subunit Interaction Interface Pymol
e3qgaL3 F:X,Y,Z->L:x,y,z Composite domain of metallo-dependent hydrolases Interaction Interface Pymol
e3qgaJ1 F:x,y,z->J:X,Y,Z Urease, beta-subunit Interaction Interface Pymol
e3qgaI4 F:X-1/2,-Y-1/2,-Z+1/2->I:x,y,z TIM barrels Interaction Interface Pymol