Domain ID e3qgkF3

Download files:
  • A: beta sandwiches
  • X: Composite domain of metallo-dependent hydrolases
  • H: Composite domain of metallo-dependent hydrolases
  • T: Composite domain of metallo-dependent hydrolases
  • F: Urease_alpha
UID: 001240163
Type: Automatic domain
Parent: e4ubpC1
Range: F:1-129,F:433-481
PDB: 3qgk
PDB Description: UREASE SUBUNIT BETA 2
UniProt: D3UJ80
Species:

Structure of domain e3qgkF3

Domains in the same chain:

e3qgkF3 F:1-129,F:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgkF4 F:130-432,F:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e3qgkA2 A:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgkA1 A:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgkC3 C:1-129,C:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgkC4 C:130-432,C:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgkD2 D:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgkD1 D:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgkF3 F:1-129,F:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgkF4 F:130-432,F:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgkG2 G:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgkG1 G:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgkI3 I:1-129,I:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgkI4 I:130-432,I:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgkJ2 J:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgkJ1 J:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgkL3 L:1-129,L:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgkL4 L:130-432,L:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgkM2 M:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgkM1 M:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgkO3 O:1-129,O:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgkO4 O:130-432,O:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels
e3qgkP2 P:1-106 Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit
e3qgkP1 P:107-225 Immunoglobulin-like beta-sandwich Urease, beta-subunit Urease, beta-subunit
e3qgkR3 R:1-129,R:433-481 Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases
e3qgkR4 R:130-432,R:482-568 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e3qgkF3 of H-group "Composite domain of metallo-dependent hydrolases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3qgkD1 F:x,y,z->D:X,Y,Z Urease, beta-subunit Interaction Interface Pymol
e3qgkD2 F:x,y,z->D:X,Y,Z Urease, gamma-subunit Interaction Interface Pymol
e3qgkC4 F:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e3qgkG2 F:x,y,z->G:X,Y,Z Urease, gamma-subunit Interaction Interface Pymol
e3qgkL4 F:X,Y,Z->L:x,y,z TIM barrels Interaction Interface Pymol
e3qgkI4 F:X-1/2,-Y-1/2,-Z+1/2->I:x,y,z TIM barrels Interaction Interface Pymol