Domain ID e3qofD1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GBP
UID: 001639214
Type: Automatic domain
Parent: e4idnB1
Range: D:31-344
Ligands: GDP MG
PDB: 3qof
PDB Description: ATLASTIN-1
UniProt: Q8WXF7
Hsap BLAST neighbor: Q8WXF7
Species: Homo sapiens

Structure of domain e3qofD1

Domains in the same chain:

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e3qofD1 D:31-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3qofD2 D:345-432 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain

Domains in the same PDB:

e3qofA2 A:31-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3qofA1 A:345-438 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e3qofB1 B:31-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3qofB2 B:345-432 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e3qofC2 C:31-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3qofC1 C:345-439 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
e3qofD1 D:31-344 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3qofD2 D:345-432 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain

Structural contacts of domain e3qofD1 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3qofB1 D:x,y,z->B:X-1/2,-Y+1/2,-Z P-loop domains-related Interaction Interface Pymol
e3qofC2 D:x,y,z->C:X-1/2,-Y-1/2,-Z P-loop domains-related Interaction Interface Pymol
e3qofC2 D:x,y,z->C:X-1,Y,Z P-loop domains-related Interaction Interface Pymol
e3qofC1 D:x,y,z->C:X-1,Y,Z Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interaction Interface Pymol
e3qofC2 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol