Domain ID e3qpbN1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000427551
Type: Automatic domain
Parent: e3pnpA1
Range: N:9-257
Ligands: R1P URA
PDB: 3qpb
PDB Description: Uridine phosphorylase
UniProt: Q5XA29
Species:

Structure of domain e3qpbN1

Domains in the same chain:

e3qpbN1 N:9-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like

Domains in the same PDB:

e3qpbA1 A:8-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbB1 B:8-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbC1 C:4-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbD1 D:8-256 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbE1 E:8-256 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbF1 F:7-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbG1 G:9-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbH1 H:8-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbI1 I:8-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbJ1 J:9-256 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbK1 K:8-256 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbL1 L:9-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbM1 M:8-256 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbN1 N:9-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbO1 O:9-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbP1 P:9-256 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbQ1 Q:9-256 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e3qpbR1 R:8-257 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like

Structural contacts of domain e3qpbN1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3qpbM1 N:x,y,z->M:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3qpbR1 N:X,Y,Z->R:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3qpbO1 N:X-1,Y+1,Z->O:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3qpbQ1 N:X,Y,Z->Q:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3qpbO1 N:X,Y,Z->O:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol