ECOD: domain e3qphA1

Domain ID e3qphA1

A: a+b three layers
X: Phospholipase D/nuclease
H: Phospholipase D/nuclease
T: Phospholipase D/nuclease
F: Regulator_TrmB

UID:	000150292
Type:	Automatic domain
Parent:	e2f5tX2
Range:	A:104-246
Ligands:	ACT GOL SUC
PDB:	3qph
PDB Description:	TrmB, a global transcription regulator
UniProt:	Q9HGZ9
Species:	Pyrococcus furiosus

Domain
In chain context
In PDB context

Structure of domain e3qphA1

Domains in the same chain:

Download Pymol

e3qphA3	A:8-103	HTH	HTH	winged
e3qphA1	A:104-246	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease
e3qphA2	A:247-342	SH3	TrmB C-terminal domain-like	TrmB C-terminal domain-like

Domains in the same PDB:

e3qphA3	A:8-103	HTH	HTH	winged
e3qphA1	A:104-246	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease
e3qphA2	A:247-342	SH3	TrmB C-terminal domain-like	TrmB C-terminal domain-like

Structural contacts of domain e3qphA1 of H-group "Phospholipase D/nuclease":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3qphA3	A:x,y,z->A:-X,-X+Y,-Z+2/3	HTH	Interaction Interface Pymol
e3qphA3	A:-X,-X+Y,-Z+2/3->A:x,y,z	HTH	Interaction Interface Pymol
e3qphA2	A:x,y,z->A:-Y,X-Y-1,Z-1/3	TrmB C-terminal domain-like	Interaction Interface Pymol