ECOD: domain e3qu1B1

Domain ID e3qu1B1

A: a+b complex topology
X: Peptide deformylase
H: Peptide deformylase
T: Peptide deformylase
F: Pep_deformylase

UID:	000414329
Type:	Automatic domain
Parent:	e1xeoA1
Range:	B:2-168
Ligands:	CL SO4 ZN
PDB:	3qu1
PDB Description:	Peptide deformylase 2
UniProt:	Q9KN16
Hsap BLAST neighbor:	Q9HBH1
Species:	Vibrio cholerae

Domains in the same chain:

Download Pymol

e3qu1B1	B:2-168	Peptide deformylase	Peptide deformylase	Peptide deformylase

Domains in the same PDB:

e3qu1A1	A:1-168	Peptide deformylase	Peptide deformylase	Peptide deformylase
e3qu1B1	B:2-168	Peptide deformylase	Peptide deformylase	Peptide deformylase

Structural contacts of domain e3qu1B1 of H-group "Peptide deformylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3qu1A1	B:x,y,z->A:X,Y,Z	Peptide deformylase	Interaction Interface Pymol
e3qu1A1	B:-Y+1/2,X+1/2,Z+1/4->A:x,y,z	Peptide deformylase	Interaction Interface Pymol
e3qu1B1	B:x,y,z->B:-Y,-X,-Z+1/2	Peptide deformylase	Interaction Interface Pymol
e3qu1B1	B:-Y,-X,-Z+1/2->B:x,y,z	Peptide deformylase	Interaction Interface Pymol
e3qu1B1	B:x,y,z->B:-X-1/2,Y-1/2,-Z+1/4	Peptide deformylase	Interaction Interface Pymol
e3qu1B1	B:-X-1/2,Y-1/2,-Z+1/4->B:x,y,z	Peptide deformylase	Interaction Interface Pymol
e3qu1A1	B:-X-1/2,Y-1/2,-Z+1/4->A:x,y,z	Peptide deformylase	Interaction Interface Pymol
e3qu1A1	B:x,y,z->A:-X-1/2,Y-1/2,-Z+1/4	Peptide deformylase	Interaction Interface Pymol
e3qu1A1	B:x,y,z->A:Y-1,X,-Z	Peptide deformylase	Interaction Interface Pymol
e3qu1B1	B:x,y,z->B:Y-1,X+1,-Z	Peptide deformylase	Interaction Interface Pymol
e3qu1B1	B:Y-1,X+1,-Z->B:x,y,z	Peptide deformylase	Interaction Interface Pymol