ECOD: domain e3qujD1

Domain ID e3qujD1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Phosphonate-bd

UID:	001765753
Type:	Automatic domain
Parent:	e3qk6A2
Range:	D:88-203
Ligands:	UNL
PDB:	3quj
PDB Description:	PHND, SUBUNIT OF ALKYLPHOSPHONATE ABC TRANSPORTER
UniProt:	Q1R3F7
Species:

Domain
In chain context
In PDB context

Structure of domain e3qujD1

Domains in the same chain:

Download Pymol

e3qujD2	D:5-87,D:204-266,D:288-312	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujD1	D:88-203	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3qujA2	A:5-87,A:204-312	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujA1	A:88-203	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujB2	B:5-87,B:204-312	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujB1	B:88-203	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujC1	C:5-87,C:204-304	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujC2	C:88-203	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujD2	D:5-87,D:204-266,D:288-312	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3qujD1	D:88-203	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3qujD1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3qujB2	D:-X-1,Y-1/2,-Z+1->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3qujB1	D:-X,Y-1/2,-Z+1->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3qujA2	D:X,Y-1,Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3qujA2	D:-X-1,Y-1/2,-Z+1->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3qujB1	D:x,y,z->B:X-1,Y+1,Z	Periplasmic binding protein-like II	Interaction Interface Pymol