ECOD: domain e3qx3B6

Domain ID e3qx3B6

A: alpha arrays
X: HTH
H: HTH
T: winged
F: DNA_topoisoIV

UID:	001262139
Type:	Automatic domain
Parent:	e1bjtA1
Range:	B:691-841
Ligands:	EVP MG
DrugDomain:	DB00773
PDB:	3qx3
PDB Description:	DNA TOPOISOMERASE 2-BETA
UniProt:	Q02880
Hsap BLAST neighbor:	Q02880
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3qx3B6

Domains in the same chain:

Download Pymol

e3qx3B8	B:449-592,B:637-690	HAD domain-like	HAD domain-related	Toprim domain
e3qx3B6	B:691-841	HTH	HTH	winged
e3qx3B7	B:842-1007	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e3qx3B5	B:1008-1105,B:1135-1201	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase

Domains in the same PDB:

e3qx3A11	A:452-591,A:638-732	HAD domain-like	HAD domain-related	Toprim domain
e3qx3A1	A:733-861	HTH	HTH	winged
e3qx3A12	A:862-1029	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e3qx3A13	A:1030-1111,A:1135-1201	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase
e3qx3B8	B:449-592,B:637-690	HAD domain-like	HAD domain-related	Toprim domain
e3qx3B6	B:691-841	HTH	HTH	winged
e3qx3B7	B:842-1007	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase	a+b domain in type II DNA topoisomerase
e3qx3B5	B:1008-1105,B:1135-1201	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase	alpha-helical domain in type II DNA topoisomerase

Structural contacts of domain e3qx3B6 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3qx3A1	B:x,y,z->A:X,Y,Z	HTH	Interaction Interface Pymol