| UID: | 000417108 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1mkmA2 |
| Range: | B:70-255 |
| Ligands: | EDO |
| PDB: | 3r4k |
| PDB Description: | Transcriptional regulator, IclR family |
| UniProt: | Q1GKY2 |
| Species: | Ruegeria sp. TM1040 |
Structure of domain e3r4kB2
Domains in the same chain:
| e3r4kB1 | B:2-69 | HTH | HTH | winged |
| e3r4kB2 | B:70-255 | Profilin-like | sensor domains | sensor domains |
Domains in the same PDB:
| e3r4kA1 | A:1-69 | HTH | HTH | winged |
| e3r4kA2 | A:70-255 | Profilin-like | sensor domains | sensor domains |
| e3r4kB1 | B:2-69 | HTH | HTH | winged |
| e3r4kB2 | B:70-255 | Profilin-like | sensor domains | sensor domains |
| e3r4kC1 | C:1-69 | HTH | HTH | winged |
| e3r4kC2 | C:70-255 | Profilin-like | sensor domains | sensor domains |
| e3r4kD1 | D:1-69 | HTH | HTH | winged |
| e3r4kD2 | D:70-255 | Profilin-like | sensor domains | sensor domains |
Structural contacts of domain e3r4kB2 of H-group "sensor domains":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3r4kA2 | B:x,y,z->A:X,Y,Z | sensor domains | Interaction Interface Pymol |
| e3r4kA1 | B:x,y,z->A:X,Y,Z | HTH | Interaction Interface Pymol |
| e3r4kD2 | B:x,y,z->D:X,Y,Z | sensor domains | Interaction Interface Pymol |
| e3r4kD1 | B:x,y,z->D:X,Y,Z-1 | HTH | Interaction Interface Pymol |
| e3r4kC1 | B:x,y,z->C:X,Y,Z-1 | HTH | Interaction Interface Pymol |
| e3r4kC1 | B:x,y,z->C:-X+3/2,Y-1/2,-Z+1 | HTH | Interaction Interface Pymol |
