ECOD: domain e3r5fA3

Domain ID e3r5fA3

A: a+b complex topology
X: Protein kinase/SAICAR synthase/ATP-grasp
H: Protein kinase/SAICAR synthase/ATP-grasp
T: ATP-grasp
F: Dala_Dala_lig_C

UID:	001164573
Type:	Automatic domain
Parent:	e1iowA1
Range:	A:140-365
Ligands:	ATP MG
PDB:	3r5f
PDB Description:	D-ALANINE--D-ALANINE LIGASE 1
UniProt:	Q2P8P8
Species:

Domains in the same chain:

Download Pymol

e3r5fA4	A:3-139	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3r5fA3	A:140-365	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp

Domains in the same PDB:

e3r5fA4	A:3-139	Rossmann-like	Rossmann-related	PreATP-grasp domain
e3r5fA3	A:140-365	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp

Structural contacts of domain e3r5fA3 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3r5fA4	A:x,y,z->A:-Y,-X,-Z+1/2	Rossmann-related	Interaction Interface Pymol
e3r5fA3	A:x,y,z->A:-Y,-X,-Z+1/2	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3r5fA4	A:-Y,-X,-Z+1/2->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3r5fA3	A:-Y,-X,-Z+1/2->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3r5fA4	A:-X+1/2,Y-1/2,-Z+3/4->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3r5fA4	A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4	Rossmann-related	Interaction Interface Pymol
e3r5fA3	A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3r5fA3	A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3r5fA3	A:x,y,z->A:-X,-Y,Z-1/2	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3r5fA3	A:-X,-Y,Z-1/2->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e3r5fA4	A:x,y,z->A:Y,X,-Z	Rossmann-related	Interaction Interface Pymol
e3r5fA4	A:Y,X,-Z->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3r5fA4	A:-Y+1/2,X-1/2,Z-1/4->A:x,y,z	Rossmann-related	Interaction Interface Pymol