Domain ID e3r6vD1

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  • A: alpha arrays
  • X: L-aspartase middle domain-like
  • H: L-aspartase middle domain-like
  • T: L-aspartase middle domain-like
  • F: Lyase_1
UID: 000424104
Type: Automatic domain
Parent: e1c3cA1
Range: D:136-389
PDB: 3r6v
PDB Description: ASPARTASE
UniProt: Q9LCC6
Hsap BLAST neighbor: P07954
Species: Bacillus sp. YM55-1

Structure of domain e3r6vD1

Domains in the same chain:

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e3r6vD3 D:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vD1 D:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vD2 D:390-463 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e3r6vA3 A:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vA1 A:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vA2 A:390-462 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3r6vB3 B:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vB1 B:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vB2 B:390-466 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3r6vC3 C:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vC1 C:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vC2 C:390-466 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3r6vD3 D:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vD1 D:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vD2 D:390-463 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3r6vE3 E:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vE1 E:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vE2 E:390-463 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3r6vF3 F:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vF1 F:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vF2 F:390-465 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3r6vG3 G:4-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vG1 G:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vG2 G:390-466 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3r6vH3 H:5-135 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3r6vH1 H:136-389 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3r6vH2 H:390-463 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e3r6vD1 of H-group "L-aspartase middle domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3r6vC2 D:x,y,z->C:X,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e3r6vC3 D:x,y,z->C:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e3r6vC1 D:x,y,z->C:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e3r6vA1 D:x,y,z->A:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e3r6vA3 D:x,y,z->A:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e3r6vB2 D:x,y,z->B:X,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e3r6vB1 D:x,y,z->B:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e3r6vF2 D:X,Y,Z->F:x,y,z L-aspartase C-terminal domain-like Interaction Interface Pymol