Domain ID e3r8tX1

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  • A: few secondary structure elements
  • X: Ribosomal protein bL28-related
  • H: Ribosomal protein bL28-related
  • T: Ribosomal protein L28
  • F: Ribosomal_L28
UID: 000420973
Type: Automatic domain
Parent: e1vw4S1
Range: X:1-77
PDB: 3r8t
PDB Description:
Species:

Structure of domain e3r8tX1

Domains in the same chain:

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e3r8tX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Domains in the same PDB:

e3r8t01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3r8t21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3r8t31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3r8t41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3r8tC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3r8tC2 C:125-271 SH3 SH3 SH3
e3r8tE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3r8tF1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3r8tG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3r8tG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3r8tH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3r8tI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3r8tI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3r8tJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3r8tK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3r8tN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3r8tO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3r8tR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3r8tS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3r8tT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3r8tU1 U:1-102 SH3 SH3 SH3
e3r8tV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3r8tW1 W:7-81 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3r8tX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3r8tY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3r8tZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3r8tX1 of H-group "Ribosomal protein bL28-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3r8tH2 X:x,y,z->H:X,Y,Z L9 N-domain-like Interaction Interface Pymol