ECOD: domain e3rb3A6

Domain ID e3rb3A6

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: IMS_HHH

UID:	001256097
Type:	Automatic domain
Parent:	e1jx4A1
Range:	A:178-240
Ligands:	CA EPE
PDB:	3rb3
PDB Description:	DNA polymerase IV
UniProt:	Q97W02
Species:

Domain
In chain context
In PDB context

Structure of domain e3rb3A6

Domains in the same chain:

Download Pymol

e3rb3A5	A:1-21,A:77-177	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3rb3A7	A:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3rb3A6	A:178-240	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3rb3A2	A:241-341	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3rb3A5	A:1-21,A:77-177	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3rb3A7	A:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3rb3A6	A:178-240	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3rb3A2	A:241-341	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3rb3A6 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3rb3A5	A:x,y,z->A:X-1/2,-Y+1/2,-Z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol