Domain ID e3rdtD1

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  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 001144756
Type: Manual and representative domain
Range: D:6-95
PDB: 3rdt
PDB Description: 3K peptide, linker and MHC H-2 class II I-Ab beta chain
In assembly with: e3rdtC1
UniProt: P14483
Hsap BLAST neighbor: P01920
Species: Mus musculus

Structure of domain e3rdtD1 in assembly with e3rdtC1

Structural contacts of domain e3rdtD1 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3rdtC1 D:x,y,z->C:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3rdtC2 D:x,y,z->C:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3rdtB4 D:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3rdtD2 D:x,y,z->D:X,Y,Z-1 Immunoglobulin-related Interaction Interface Pymol
e3rdtC2 D:x,y,z->C:X,Y,Z-1 Immunoglobulin-related Interaction Interface Pymol
e3rdtB3 D:x,y,z->B:-X+1/2,Y-1/2,-Z Immunoglobulin-related Interaction Interface Pymol