Domain ID e3rgwL2

Download files:
  • A: a+b two layers
  • X: FAD-linked reductases, C-terminal domain-like
  • H: Ni-Fe binding domain in nickel-iron hydrogenase large subunit
  • T: Ni-Fe binding domain in nickel-iron hydrogenase large subunit
  • F: NiFeSe_Hases
UID: 000145074
Type: Automatic domain
Parent: e1ublL5
Range: L:2-53,L:563-603
Ligands: MG NFU
PDB: 3rgw
PDB Description: MEMBRANE-BOUND HYDROGENASE (NIFE) LARGE SUBUNIT HOXG
UniProt: P31891
Species:

Structure of domain e3rgwL2

Domains in the same chain:

e3rgwL2 L:2-53,L:563-603 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3rgwL3 L:54-96,L:510-562 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3rgwL1 L:96-336,L:407-509 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e3rgwL4 L:337-407 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit

Domains in the same PDB:

e3rgwL2 L:2-53,L:563-603 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3rgwL3 L:54-96,L:510-562 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3rgwL1 L:96-336,L:407-509 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e3rgwL4 L:337-407 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit
e3rgwS2 S:5-182 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3rgwS1 S:183-274 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit

Structural contacts of domain e3rgwL2 of H-group "Ni-Fe binding domain in nickel-iron hydrogenase large subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3rgwS2 L:X,Y,Z->S:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3rgwL4 L:x,y,z->L:X-1/2,-Y+1/2,-Z all-beta domain in nickel-iron hydrogenase large subunit Interaction Interface Pymol
e3rgwL1 L:X-1/2,-Y+1/2,-Z->L:x,y,z alpha-helical domain in nickel-iron hydrogenase, large subunit Interaction Interface Pymol
e3rgwS2 L:-X,Y-1/2,-Z+1/2->S:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol