Domain ID e3riaD2

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  • A: alpha bundles
  • X: Neurotransmitter-gated ion-channel transmembrane pore
  • H: Neurotransmitter-gated ion-channel transmembrane pore
  • T: Neurotransmitter-gated ion-channel transmembrane pore
  • F: Neur_chan_memb
UID: 000420488
Type: Automatic domain
Parent: e1oedA1
Range: D:213-340
Ligands: IOD IVM OCT
PDB: 3ria
PDB Description: Avermectin-sensitive glutamate-gated chloride channel GluCl alpha
Hsap BLAST neighbor: P23416
Species: Caenorhabditis elegans

Structure of domain e3riaD2

Domains in the same chain:

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e3riaD1 D:1-214 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e3riaD2 D:213-340 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Domains in the same PDB:

e3riaA1 A:1-214 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e3riaA2 A:213-340 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e3riaB1 B:1-214 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e3riaB2 B:213-340 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e3riaC1 C:1-214 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e3riaC2 C:213-339 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e3riaD1 D:1-214 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e3riaD2 D:213-340 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e3riaE1 E:1-214 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e3riaE2 E:213-340 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e3riaF4 F:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaF3 F:123-221 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaG4 G:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaG3 G:123-221 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaH4 H:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaH3 H:123-221 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaI4 I:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaI3 I:123-221 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaJ4 J:1-122 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaJ3 J:123-221 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaK1 K:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaK2 K:111-210 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaL1 L:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaL2 L:111-210 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaM1 M:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaM2 M:111-210 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaN1 N:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaN2 N:110-185 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaO6 O:1-109 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3riaO5 O:110-208 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3riaD2 of H-group "Neurotransmitter-gated ion-channel transmembrane pore":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3riaE2 D:X,Y,Z->E:x,y,z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e3riaE1 D:X,Y,Z->E:x,y,z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e3riaC2 D:x,y,z->C:X,Y,Z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e3riaK2 D:x,y,z->K:X-1/2,-Y+3/2,-Z+1/4 Immunoglobulin-related Interaction Interface Pymol
e3riaG3 D:x,y,z->G:X-1/2,-Y+3/2,-Z+1/4 Immunoglobulin-related Interaction Interface Pymol