| UID: | 001181581 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3qwvA1 |
| Range: | A:7-271 |
| Ligands: | SAH SO4 ZN |
| PDB: | 3rib |
| PDB Description: | N-lysine methyltransferase SMYD2 |
| UniProt: | Q9NRG4 |
| Hsap BLAST neighbor: | Q9NRG4 |
| Species: | Homo sapiens |
Structure of domain e3ribA9
Domains in the same chain:
| e3ribA9 | A:7-271 | beta-clip | SET domain-like | SET domain-like |
| e3ribA10 | A:272-436 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
Domains in the same PDB:
| e3ribA9 | A:7-271 | beta-clip | SET domain-like | SET domain-like |
| e3ribA10 | A:272-436 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e3ribB1 | B:7-271 | beta-clip | SET domain-like | SET domain-like |
| e3ribB2 | B:272-436 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
Structural contacts of domain e3ribA9 of H-group "SET domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3ribB1 | A:X,Y-1,Z->B:x,y,z | SET domain-like | Interaction Interface Pymol |
| e3ribA9 | A:x,y,z->A:-X,Y,-Z | SET domain-like | Interaction Interface Pymol |
| e3ribA9 | A:-X,Y,-Z->A:x,y,z | SET domain-like | Interaction Interface Pymol |
| e3ribB2 | A:X,Y,Z->B:x,y,z | ARM repeat | Interaction Interface Pymol |
| e3ribB1 | A:X,Y,Z->B:x,y,z | SET domain-like | Interaction Interface Pymol |
| e3ribB2 | A:x,y,z->B:X,Y,Z-1 | ARM repeat | Interaction Interface Pymol |
| e3ribA10 | A:X,Y-1,Z->A:x,y,z | ARM repeat | Interaction Interface Pymol |
| e3ribB1 | A:-X,Y,-Z->B:x,y,z | SET domain-like | Interaction Interface Pymol |
