Domain ID e3rimB2

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: Transket_pyr
UID: 000985582
Type: Automatic domain
Parent: e2r8oA2
Range: B:351-558
Ligands: TPP
PDB: 3rim
PDB Description: TRANSKETOLASE
UniProt: P9WG24
Hsap BLAST neighbor: P29401
Species:

Structure of domain e3rimB2

Domains in the same chain:

e3rimB3 B:1-350 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimB2 B:351-558 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimB1 B:559-694 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Domains in the same PDB:

e3rimA1 A:6-355 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimA2 A:356-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimA3 A:564-699 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3rimB3 B:1-350 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimB2 B:351-558 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimB1 B:559-694 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3rimC3 C:1-350 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimC2 C:351-558 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimC1 C:559-694 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e3rimD3 D:1-350 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimD2 D:351-558 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e3rimD1 D:559-694 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Structural contacts of domain e3rimB2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3rimD3 B:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3rimD2 B:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3rimD1 B:X,Y,Z->D:x,y,z TK C-terminal domain-like Interaction Interface Pymol
e3rimD2 B:X-1,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e3rimD3 B:X,Y-1,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol