| UID: | 000433719 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1m2kA2 |
| Range: | B:31-142,B:204-302 |
| Ligands: | NAD ZN |
| PDB: | 3riy |
| PDB Description: | NAD-dependent deacetylase sirtuin-5 |
| UniProt: | Q9NXA8 |
| Hsap BLAST neighbor: | Q9NXA8 |
| Species: | Homo sapiens |
Structure of domain e3riyB2
Domains in the same chain:
| e3riyB2 | B:31-142,B:204-302 | Rossmann-like | Rossmann-related | DHS-like NAD/FAD-binding domain |
| e3riyB1 | B:143-203 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Domains in the same PDB:
| e3riyA2 | A:31-142,A:204-302 | Rossmann-like | Rossmann-related | DHS-like NAD/FAD-binding domain |
| e3riyA1 | A:143-203 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e3riyB2 | B:31-142,B:204-302 | Rossmann-like | Rossmann-related | DHS-like NAD/FAD-binding domain |
| e3riyB1 | B:143-203 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Structural contacts of domain e3riyB2 of H-group "Rossmann-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3riyA2 | B:x,y,z->A:X,Y,Z | Rossmann-related | Interaction Interface Pymol |
| e3riyA2 | B:x,y,z->A:-X-1/2,-Y,Z-1/2 | Rossmann-related | Interaction Interface Pymol |
| e3riyA1 | B:x,y,z->A:-X,Y-1/2,-Z-1/2 | Rubredoxin-related | Interaction Interface Pymol |
| e3riyA2 | B:x,y,z->A:-X,Y-1/2,-Z-1/2 | Rossmann-related | Interaction Interface Pymol |
| e3riyA2 | B:-X,Y-1/2,-Z-1/2->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e3riyA1 | B:-X,Y-1/2,-Z-1/2->A:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e3riyA2 | B:-X-1,Y-1/2,-Z-1/2->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e3riyB1 | B:X-1,Y,Z->B:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
| e3riyB1 | B:X-1/2,-Y+1/2,-Z-1->B:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
