ECOD: domain e3rkoB1

Domain ID e3rkoB1

A: alpha complex topology
X: Sodium/proton antiporter subunits-like
H: Sodium/proton antiporter subunits-like
T: NADH-quinone oxidoreductase subunit L (NuoL)-related
F: Proton_antipo_M,Proton_antipo_N

UID:	000425589
Type:	Automatic domain
Parent:	e3rkoL1
Range:	B:1-612
Ligands:	CA7 LFA
PDB:	3rko
PDB Description:	NADH-QUINONE OXIDOREDUCTASE SUBUNIT L
UniProt:	C6E9S4
Hsap BLAST neighbor:	P03915
Species:

Domains in the same chain:

Download Pymol

e3rkoB1	B:1-612	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related

Domains in the same PDB:

e3rkoA1	A:15-126	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A
e3rkoB1	B:1-612	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e3rkoC1	C:1-504	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e3rkoD1	D:1-485	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e3rkoE1	E:15-126	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A	NADH-quinone oxidoreductase subunit A
e3rkoF1	F:1-168	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J
e3rkoG1	G:1-100	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K
e3rkoJ1	J:1-168	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J	NADH-quinone oxidoreductase subunit J
e3rkoK1	K:1-100	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K
e3rkoL1	L:1-612	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e3rkoM1	M:1-504	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e3rkoN1	N:1-485	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related

Structural contacts of domain e3rkoB1 of H-group "Sodium/proton antiporter subunits-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3rkoC1	B:X,Y,Z->C:x,y,z	Sodium/proton antiporter subunits-like	Interaction Interface Pymol
e3rkoD1	B:X,Y,Z->D:x,y,z	Sodium/proton antiporter subunits-like	Interaction Interface Pymol
e3rkoL1	B:x,y,z->L:X-1,Y-1,Z-1	Sodium/proton antiporter subunits-like	Interaction Interface Pymol
e3rkoG1	B:X,Y,Z->G:x,y,z	NADH-quinone oxidoreductase subunit K	Interaction Interface Pymol
e3rkoF1	B:X,Y,Z->F:x,y,z	NADH-quinone oxidoreductase subunit J	Interaction Interface Pymol
e3rkoA1	B:X,Y,Z->A:x,y,z	NADH-quinone oxidoreductase subunit A	Interaction Interface Pymol