ECOD: domain e3rn8A2

Domain ID e3rn8A2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Lig_chan-Glu_bd

UID:	001522477
Type:	Automatic domain
Parent:	e1mqiA3
Range:	A:4-108,A:219-261
Ligands:	GLU RN8 SO4 ZN
PDB:	3rn8
PDB Description:	Glutamate receptor 2
UniProt:	P42262
Hsap BLAST neighbor:	P42262
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3rn8A2	A:4-108,A:219-261	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3rn8A1	A:109-218	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3rn8A2	A:4-108,A:219-261	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3rn8A1	A:109-218	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3rn8B2	B:3-108,B:219-261	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3rn8B1	B:109-218	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3rn8C2	C:4-108,C:219-261	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3rn8C1	C:109-218	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3rn8A2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3rn8C2	A:X,Y,Z->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3rn8C1	A:X,Y,Z->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3rn8C1	A:X-1/2,-Y+1/2,-Z+2->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3rn8C2	A:X-1/2,-Y+1/2,-Z+2->C:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3rn8B1	A:X,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3rn8A2	A:x,y,z->A:X,Y,Z-1	Periplasmic binding protein-like II	Interaction Interface Pymol
e3rn8A1	A:X,Y,Z-1->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3rn8A2	A:X,Y,Z-1->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol