ECOD: domain e3ry3B2

Domain ID e3ry3B2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_5

UID:	001522514
Type:	Automatic domain
Parent:	e1xocA4
Range:	B:252-466
Ligands:	ACT
PDB:	3ry3
PDB Description:	Putative solute-binding protein
UniProt:	Q7CJS8
Species:

Domain
In chain context
In PDB context

Structure of domain e3ry3B2

Domains in the same chain:

Download Pymol

e3ry3B1	B:30-59,B:152-251,B:467-521	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3ry3B3	B:60-151	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e3ry3B2	B:252-466	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3ry3A3	A:30-59,A:152-251,A:467-521	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3ry3A1	A:60-151	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e3ry3A2	A:252-466	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3ry3B1	B:30-59,B:152-251,B:467-521	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3ry3B3	B:60-151	Alpha-beta plaits	Oligo-peptide binding protein (OPPA) insertion domain	Oligo-peptide binding protein (OPPA) insertion domain
e3ry3B2	B:252-466	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3ry3B2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ry3A3	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3ry3A2	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3ry3A2	B:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol