Domain ID e3s4sE1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000429379
Type: Automatic domain
Parent: e1k5nB1
Range: E:94-190
Ligands: GOL
PDB: 3s4s
PDB Description: HLA class II histocompatibility antigen, DRB1-1 beta chain
UniProt: P04229
Hsap BLAST neighbor: P01911
Species: Homo sapiens

Structure of domain e3s4sE1

Domains in the same chain:

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e3s4sE2 E:0-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s4sE1 E:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3s4sA2 A:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s4sA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s4sB2 B:0-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s4sB1 B:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s4sD2 D:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s4sD1 D:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s4sE2 E:0-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s4sE1 E:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s4sG1 G:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s4sG2 G:98-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s4sH1 H:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s4sH2 H:98-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3s4sE1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3s4sD2 E:x,y,z->D:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3s4sD1 E:x,y,z->D:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3s4sA1 E:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3s4sA2 E:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3s4sH1 E:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3s4sH1 E:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3s4sH1 E:-X,Y-1/2,-Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol