Domain ID e3s5lE1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000429391
Type: Automatic domain
Parent: e1k5nB1
Range: E:94-190
Ligands: GOL
PDB: 3s5l
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-1 BETA CHAIN
UniProt: P04229
Hsap BLAST neighbor: P01911
Species: Homo sapiens

Structure of domain e3s5lE1

Domains in the same chain:

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e3s5lE2 E:0-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s5lE1 E:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3s5lA2 A:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s5lA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s5lB2 B:0-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s5lB1 B:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s5lD2 D:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s5lD1 D:82-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s5lE2 E:0-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3s5lE1 E:94-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s5lG1 G:2-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s5lG2 G:98-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s5lH1 H:0-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3s5lH2 H:98-178 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3s5lE1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3s5lD2 E:x,y,z->D:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3s5lD1 E:x,y,z->D:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3s5lD2 E:X-1/2,-Y-3/2,-Z-1->D:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e3s5lD1 E:X-1/2,-Y-3/2,-Z-1->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3s5lH1 E:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3s5lH1 E:X-1/2,-Y-3/2,-Z-1->E:x,y,z Immunoglobulin-related Interaction Interface Pymol