Domain ID e3s6pD2

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Peptidase_A21
UID: 001874592
Type: Automatic domain
Parent: e1ohfA2
Range: D:65-277,D:423-575
Ligands: CL
PDB: 3s6p
PDB Description: CAPSID PROTEIN
UniProt: Q82462
Species: Helicoverpa armigera stunt virus

Structure of domain e3s6pD2

Domains in the same chain:

Download Pymol

e3s6pD2 D:65-277,D:423-575 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s6pD1 D:278-422 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein

Domains in the same PDB:

e3s6pA2 A:47-277,A:423-575 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s6pA1 A:278-422 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein
e3s6pB2 B:46-277,B:423-575 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s6pB1 B:278-422 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein
e3s6pC2 C:40-280,C:421-575 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s6pC1 C:281-420 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein
e3s6pD2 D:65-277,D:423-575 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s6pD1 D:278-422 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein

Structural contacts of domain e3s6pD2 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3s6pB2 D:x,y,z->B:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s6pB2 D:x,y,z->C:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s6pB2 D:X,Y,Z->G:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol